A Study of the Effects of Diet on Human Gut Microbial Community Structure and Mercury Metabolism

Abstract

Background: Recent research showing how dietary interventions substantially influence the potential presence of widespread and stable bacterial core phyla in the human colon has garnered a considerable amount of attention. Because the human gut can play a major role in host health, there is currently some interest in observing how diet influences human gut microbial composition and how changes in diet affect the potential for gut microbiota to transform mercury. This study aims to discover how different kinds of diet affect the nature and magnitude of microbial Hg transformations in the human gut environment. Methods: Fecal samples have been collected from 5 human male individuals at University of Ottawa and stored at -80ºC for further investigation. Using high throughput DNA amplicon sequencing targeting the 16s rRNA V4 region, we investigated the microbial community structure of the gut in 5 healthy male. Mercury biotransformations in the pooled fecal sample have been carried out using stable isotopes of mercury (198HgCl2 and Me199HgCl) and analysis was conducted by using inductively coupled plasma mass spectrometry (ICP-MS). Results and conclusions: We were not able to detect any significant Hg methylation or MeHg demethylation. We suspect this is due to Enterobacteria dominating the microbial community structure after 96h; Although Enterobacteria are part of the typical microbiota of a healthy individual, they do not possess genes required for Hg methylation. As such, our microbial data support our chemical analyses. We were not able to identify whether a change in diet affected Hg transformations in the human gut environment.